Transcript: PSMG3-AS1:12

Basic information

LNCipedia transcript ID: PSMG3-AS1:12 
HGNC Gene Symbol: PSMG3-AS1    
HGNC Full Gene Name: PSMG3 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000230487
Ensembl Transcript ID: ENST00000612019
Location (hg38): chr7:1570169-1584632
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 586 bp
Exons: 4
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000612019.1
Alternative gene names: ENSG00000230487.7; PSMG3-AS1; KIAA1908


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -26.1053 non-coding 
CPAT coding probability 2.81% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PSMG3-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 PSMG3-AS1:12
4.1 PSMG3-AS1:12
5.0 PSMG3-AS1:12
5.1 PSMG3-AS1:12
5.2 PSMG3-AS1:12