Transcript: PSMG3-AS1:8

Basic information

LNCipedia transcript ID: PSMG3-AS1:8 
HGNC Gene Symbol: PSMG3-AS1    
HGNC Full Gene Name: PSMG3 antisense RNA 1 (head to head)
Ensembl Gene ID: ENSG00000230487
Ensembl Transcript ID: ENST00000437964
Location (hg38): chr7:1570135-1586545
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2666 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000437964; ENST00000437964.1; AC093734.11-002; OTTHUMT00000322710.1; ENST00000437964.5
Alternative gene names: ENSG00000230487; AC093734.11; ENSG00000230487.3; OTTHUMG00000151452.2; PSMG3-AS1; ENSG00000230487.7; KIAA1908


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -26.1053 non-coding 
CPAT coding probability 42.67% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PSMG3-AS1:8 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-MAFK-1:3
3.1 lnc-MAFK-1:3
4.0 PSMG3-AS1:8
4.1 PSMG3-AS1:8
5.0 PSMG3-AS1:8
5.1 PSMG3-AS1:8
5.2 PSMG3-AS1:8