Transcript: PTCHD1-AS:6

Basic information

LNCipedia transcript ID: PTCHD1-AS:6 
LNCipedia gene ID: PTCHD1-AS
Location (hg38): chrX:23270064-23333366
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 203 bp
Exons: 2
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233067.2|FTMT28900026192.1
Alternative gene names: PTCHD1AS1; PTCHD1AS2; DDX53-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score non-coding 
CPAT coding probability 0.03% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PTCHD1-AS:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PTCHD1-AS:6
5.0 PTCHD1-AS:6
5.1 PTCHD1-AS:6
5.2 PTCHD1-AS:6