Transcript: PTOV1-AS1:3

Basic information

LNCipedia transcript ID: PTOV1-AS1:3 
LNCipedia gene ID: PTOV1-AS1
Location (hg38): chr19:49838646-49851676
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2148 bp
Exons: 4
Sources: Refseq - Dec 2014
Alternative transcript names: NR_040037
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 142.2587 coding 
CPAT coding probability 2.05% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PTOV1-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PNKP-1:3
4.0 PTOV1-AS1:3
4.1 PTOV1-AS1:3
5.0 PTOV1-AS1:3
5.1 PTOV1-AS1:3
5.2 PTOV1-AS1:3