Transcript: PTOV1-AS1:9

Basic information

LNCipedia transcript ID: PTOV1-AS1:9 
LNCipedia gene ID: PTOV1-AS1
Location (hg38): chr19:49846828-49851060
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4233 bp
Exons: 1
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000268006.1|ENCT00000216556.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 5.5783 non-coding 
CPAT coding probability 1.06% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PTOV1-AS1:9 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PTOV1-AS1:9
5.0 PTOV1-AS1:9
5.1 PTOV1-AS1:9
5.2 PTOV1-AS1:9