Transcript: PTOV1-AS2:1

Basic information

LNCipedia transcript ID: PTOV1-AS2:1 
LNCipedia gene ID: PTOV1-AS2
Location (hg38): chr19:49854967-49859553
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 4371 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT067264
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 94.9299 coding 
CPAT coding probability 21.47% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
PTOV1-AS2:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-PNKP-6:1
4.0 PTOV1-AS2:1
4.1 PTOV1-AS2:1
5.0 PTOV1-AS2:1
5.1 PTOV1-AS2:1
5.2 PTOV1-AS2:1