Transcript: PTPRG-AS1:1
Basic information
LNCipedia transcript ID: PTPRG-AS1:1
HGNC Gene Symbol: PTPRG-AS1
HGNC Full Gene Name:
PTPRG antisense RNA 1
Ensembl Gene ID:
ENSG00000241472
Ensembl Transcript ID:
ENST00000495542
Location (hg38): chr3:62264042-62369330
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 502 bp
Exons: 5
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000495542; ENST00000495542.1; RP11-204J18.3-007; OTTHUMT00000351669.1; NONHSAT090181; ENST00000495542.5
Alternative gene names: ENSG00000241472; RP11-204J18.3; ENSG00000241472.1; OTTHUMG00000158657.1; ENSG00000241472.2; PTPRG-AS1; ENSG00000241472.6;
RNA sequence:
Structure:
Protein coding potential
In stringent set: yes
Locus conservation
| Locus conservation? |  |
 |
 |
 |
|---|---|---|---|---|
| PTPRG-AS1:1 | no | no | no | no |
Available literature
- Iranpour (2016), Expression analysis of four long noncoding RNAs in breast cancer., Tumour Biol.
- Zhao (2014), Comprehensive characterization of cancer subtype associated long non-coding RNAs and their clinical implications., Sci Rep
LNCipedia transcript ID history
| LNCipedia version | LNCipedia transcript ID |
|---|---|
| 1.3 | lnc-FEZF2-1:1 |
| 3.1 | lnc-FEZF2-1:1 |
| 4.0 | PTPRG-AS1:1 |
| 4.1 | PTPRG-AS1:1 |
| 5.0 | PTPRG-AS1:1 |
| 5.1 | PTPRG-AS1:1 |
| 5.2 | PTPRG-AS1:1 |