Transcript: PWRN3:1

Basic information

LNCipedia transcript ID: PWRN3:1 
HGNC Gene Symbol: PWRN3    
HGNC Full Gene Name: Prader-Willi region non-protein coding RNA 3
Ensembl Gene ID: ENSG00000260760
Ensembl Transcript ID: ENST00000566797
RefSeq ID: NR_130780
Location (hg38): chr15:24441127-24447967
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 849 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000566797.1; RP11-580I1.3-001; OTTHUMT00000431878.1; NONHSAT040905; NR_130780.1
Alternative gene names: ENSG00000260760.1; RP11-580I1.3; OTTHUMG00000176387.1; PWRN3;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -22.2722 non-coding 
CPAT coding probability 8.57% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PWRN3:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-C15orf2-3:1
4.0 PWRN3:1
4.1 PWRN3:1
5.0 PWRN3:1
5.1 PWRN3:1
5.2 PWRN3:1