Transcript: PXN-AS1:19

Basic information

LNCipedia transcript ID: PXN-AS1:19 
LNCipedia gene ID: PXN-AS1
Location (hg38): chr12:120201354-120210107
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 510 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000255857.1|ENST00000538804.1
Alternative gene names: EyeLinc4


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -281.2263 non-coding 
CPAT coding probability 0.04% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
PXN-AS1:19 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 PXN-AS1:19
5.0 PXN-AS1:19
5.1 PXN-AS1:19
5.2 PXN-AS1:19