Transcript: RABGAP1L-IT1:1

Basic information

LNCipedia transcript ID: RABGAP1L-IT1:1 
HGNC Gene Symbol: RABGAP1L-IT1    
HGNC Full Gene Name: RABGAP1L intronic transcript 1
Ensembl Gene ID: ENSG00000223525
Ensembl Transcript ID: ENST00000414890
Location (hg38): chr1:174896958-174897996
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 737 bp
Exons: 2
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000414890.1; RABGAP1L-IT1-001; OTTHUMT00000084579.1; NONHSAT007738
Alternative gene names: ENSG00000223525.1; RABGAP1L-IT1; OTTHUMG00000034938.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -11.0683 non-coding 
CPAT coding probability 0.28% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RABGAP1L-IT1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CACYBP-1:1
4.0 RABGAP1L-IT1:1
4.1 RABGAP1L-IT1:1
5.0 RABGAP1L-IT1:1
5.1 RABGAP1L-IT1:1
5.2 RABGAP1L-IT1:1