Transcript: RASAL2-AS1:2

Basic information

LNCipedia transcript ID: RASAL2-AS1:2 
HGNC Gene Symbol: RASAL2-AS1    
HGNC Full Gene Name: RASAL2 antisense RNA 1
Ensembl Gene ID: ENSG00000224687
Ensembl Transcript ID: ENST00000421505
Location (hg38): chr1:178091508-178093984
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 2329 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000421505; ENST00000421505.1; RP11-21M7.1-001; OTTHUMT00000098177.1
Alternative gene names: ENSG00000224687; RP11-21M7.1; ENSG00000224687.1; OTTHUMG00000040865.1; RASAL2-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 5.2159 non-coding 
CPAT coding probability 1.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RASAL2-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-SEC16B.1-1:1
3.1 lnc-SEC16B.1-3:1
4.0 RASAL2-AS1:2
4.1 RASAL2-AS1:2
5.0 RASAL2-AS1:2
5.1 RASAL2-AS1:2
5.2 RASAL2-AS1:2