Transcript: RASSF8-AS1:18

Basic information

LNCipedia transcript ID: RASSF8-AS1:18 
HGNC Gene Symbol: RASSF8-AS1    
HGNC Full Gene Name: RASSF8 antisense RNA 1
Ensembl Gene ID: ENSG00000246695
Ensembl Transcript ID: ENST00000500102
Location (hg38): chr12:25954921-25957585
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 698 bp
Exons: 4
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000500102; ENST00000500102.2; RP11-877E17.2-001; OTTHUMT00000402344.1; ENST00000500102.6
Alternative gene names: ENSG00000246695; RP11-877E17.2; ENSG00000246695.3; OTTHUMG00000169126.2; RASSF8-AS1; ENSG00000246695.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.3023 non-coding 
CPAT coding probability 5.59% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RASSF8-AS1:18 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-BHLHE41-1:11
3.1 lnc-BHLHE41-2:10
4.0 RASSF8-AS1:18
4.1 RASSF8-AS1:18
5.0 RASSF8-AS1:18
5.1 RASSF8-AS1:18
5.2 RASSF8-AS1:18