Transcript: RBFADN:9

Basic information

LNCipedia transcript ID: RBFADN:9 
LNCipedia gene ID: RBFADN
Ensembl Gene ID: ENSG00000261126
Ensembl Transcript ID: ENST00000564686
Location (hg38): chr18:80066911-80095482
Strand: +
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 561 bp
Exons: 4
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000564686.1; RP11-795F19.1-007; OTTHUMT00000431701.1; NONHSAT060079; ENST00000564686.5
Alternative gene names: ENSG00000261126.1; RP11-795F19.1; OTTHUMG00000176254.2; ENSG00000261126.3; RBFADN; ENSG00000261126.7;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -28.2056 non-coding 
CPAT coding probability 5.71% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RBFADN:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RBFA-1:6
4.0 RBFADN:9
4.1 RBFADN:9
5.0 RBFADN:9
5.1 RBFADN:9
5.2 RBFADN:9