Transcript: RBM26-AS1:4

Basic information

LNCipedia transcript ID: RBM26-AS1:4 
HGNC Gene Symbol: RBM26-AS1    
HGNC Full Gene Name: RBM26 antisense RNA 1
Ensembl Gene ID: ENSG00000227354
Ensembl Transcript ID: ENST00000456602
Location (hg38): chr13:79406309-79422955
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1756 bp
Exons: 6
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000456602; ENST00000456602.1; RBM26-AS1-001; OTTHUMT00000045375.1; NONHSAT034477; ENST00000456602.5
Alternative gene names: ENSG00000227354; RBM26-AS1; ENSG00000227354.1; OTTHUMG00000017131.1; ENSG00000227354.2; ENSG00000227354.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -15.1562 non-coding 
CPAT coding probability 1.88% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RBM26-AS1:4 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-NDFIP2-2:3
3.1 lnc-NDFIP2-2:2
4.0 RBM26-AS1:4
4.1 RBM26-AS1:4
5.0 RBM26-AS1:4
5.1 RBM26-AS1:4
5.2 RBM26-AS1:4