Transcript: RBMS3-AS1:1

Basic information

LNCipedia transcript ID: RBMS3-AS1:1 
HGNC Gene Symbol: RBMS3-AS1    
HGNC Full Gene Name: RBMS3 antisense RNA 1
Ensembl Gene ID: ENSG00000235593
Ensembl Transcript ID: ENST00000414547
RefSeq ID: NR_046556
Location (hg38): chr3:29926811-29934156
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 554 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000414547.1; RBMS3-AS1-001; OTTHUMT00000341277.1; NONHSAT088807; NR_046556; NR_046556.1
Alternative gene names: ENSG00000235593.1; RBMS3-AS1; OTTHUMG00000155691.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -358.7762 non-coding 
CPAT coding probability 0.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RBMS3-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-GADL1-2:1
4.0 RBMS3-AS1:1
4.1 RBMS3-AS1:1
5.0 RBMS3-AS1:1
5.1 RBMS3-AS1:1
5.2 RBMS3-AS1:1