Transcript: RDH10-AS1:1

Basic information

LNCipedia transcript ID: RDH10-AS1:1 
HGNC Gene Symbol: RDH10-AS1    
HGNC Full Gene Name: RDH10 antisense RNA 1
Ensembl Gene ID: ENSG00000250295
Ensembl Transcript ID: ENST00000514599
RefSeq ID: NR_125388
Location (hg38): chr8:73310906-73356461
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3261 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000514599.1; RP11-434I12.2-001; OTTHUMT00000378988.1; NONHSAT127241; NR_125388; ENST00000514599.5; NR_125388.1
Alternative gene names: ENSG00000250295.2; RP11-434I12.2; OTTHUMG00000164493.1; ENSG00000250295.6; RDH10-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -25.1321 non-coding 
CPAT coding probability 1.94% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RDH10-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-RPL7-1:1
4.0 RDH10-AS1:1
4.1 RDH10-AS1:1
5.0 RDH10-AS1:1
5.1 RDH10-AS1:1
5.2 RDH10-AS1:1