Transcript: RFPL3S:2

Basic information

LNCipedia transcript ID: RFPL3S:2 
HGNC Gene Symbol: RFPL3S    
HGNC Full Gene Name: RFPL3 antisense
Ensembl Gene ID: ENSG00000205853
Ensembl Transcript ID: ENST00000577714
Location (hg38): chr22:32362974-32382052
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 489 bp
Exons: 7
Sources: Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000577714.1
Alternative gene names: ENSG00000205853.10; RFPL3S


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -27.369 non-coding 
CPAT coding probability 4.34% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RFPL3S:2 no no no no

Available literature

  1. Seroussi (1999), Duplications on human chromosome 22 reveal a novel Ret Finger Protein-like gene family with sense and endogenous antisense transcripts., Genome Res.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 RFPL3S:2
5.1 RFPL3S:2
5.2 RFPL3S:2