Transcript: RHOXF1-AS1:4

Basic information

LNCipedia transcript ID: RHOXF1-AS1:4 
LNCipedia gene ID: RHOXF1-AS1
RefSeq ID: NR_131238
Location (hg38): chrX:120036236-120146855
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2103 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_131238.1
Alternative gene names: RHOXF1-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 10.0121 non-coding 
CPAT coding probability 1.89% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RHOXF1-AS1:4 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 RHOXF1-AS1:4
5.1 RHOXF1-AS1:4
5.2 RHOXF1-AS1:4