Transcript: RNASEH2B-AS1:11

Basic information

LNCipedia transcript ID: RNASEH2B-AS1:11 
HGNC Gene Symbol: RNASEH2B-AS1    
HGNC Full Gene Name: RNASEH2B antisense RNA 1
Ensembl Gene ID: ENSG00000233672
Ensembl Transcript ID: ENST00000631080
Location (hg38): chr13:50862172-50891474
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1707 bp
Exons: 6
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000631080.2
Alternative gene names: ENSG00000233672.6; RNASEH2B-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -10.5974 non-coding 
CPAT coding probability 8.36% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RNASEH2B-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 RNASEH2B-AS1:11
4.1 RNASEH2B-AS1:11
5.0 RNASEH2B-AS1:11
5.1 RNASEH2B-AS1:11
5.2 RNASEH2B-AS1:11