Transcript: RNASEH2B-AS1:17

Basic information

LNCipedia transcript ID: RNASEH2B-AS1:17 
LNCipedia gene ID: RNASEH2B-AS1
Location (hg38): chr13:50882378-50910621
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 534 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000233672.2|ENST00000454605.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -66.0857 non-coding 
CPAT coding probability 0.19% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RNASEH2B-AS1:17 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 RNASEH2B-AS1:17
5.0 RNASEH2B-AS1:17
5.1 RNASEH2B-AS1:17
5.2 RNASEH2B-AS1:17