Transcript: RNF139-AS1:2

Basic information

LNCipedia transcript ID: RNF139-AS1:2 
LNCipedia gene ID: RNF139-AS1
Location (hg38): chr8:124472307-124474766
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2460 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT128586
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -42.7728 non-coding 
CPAT coding probability 36.55% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
RNF139-AS1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TATDN1-1:5
4.0 RNF139-AS1:2
4.1 RNF139-AS1:2
5.0 RNF139-AS1:2
5.1 RNF139-AS1:2
5.2 RNF139-AS1:2