Transcript: RNF139-AS1:5

Basic information

LNCipedia transcript ID: RNF139-AS1:5 
LNCipedia gene ID: RNF139-AS1
Location (hg38): chr8:124462499-124474563
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 5639 bp
Exons: 2
Sources: Broad Institute
Alternative transcript names: TCONS_00014530
Alternative gene names: XLOC_007206; linc-TMEM65;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 4.7201 non-coding 
CPAT coding probability 20.18% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RNF139-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-TATDN1-1:3
3.1 lnc-TATDN1-1:3
4.0 RNF139-AS1:5
4.1 RNF139-AS1:5
5.0 RNF139-AS1:5
5.1 RNF139-AS1:5
5.2 RNF139-AS1:5