Transcript: RNF139-AS1:9

Basic information

LNCipedia transcript ID: RNF139-AS1:9 
LNCipedia gene ID: RNF139-AS1
Location (hg38): chr8:124464258-124466107
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1850 bp
Exons: 1
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA1849:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.7201 non-coding 
CPAT coding probability 23.73% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RNF139-AS1:9 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 RNF139-AS1:9
4.1 RNF139-AS1:9
5.0 RNF139-AS1:9
5.1 RNF139-AS1:9
5.2 RNF139-AS1:9