Transcript: RNF144A-AS1:8

Basic information

LNCipedia transcript ID: RNF144A-AS1:8 
HGNC Gene Symbol: RNF144A-AS1    
HGNC Full Gene Name: RNF144A antisense RNA 1
Ensembl Gene ID: ENSG00000228203
Ensembl Transcript ID: ENST00000439208
Location (hg38): chr2:6916851-6918663
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 757 bp
Exons: 2
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000439208; ENST00000439208.1; AC017076.4-006; OTTHUMT00000323699.1; NONHSAT068933
Alternative gene names: ENSG00000228203; AC017076.4; ENSG00000228203.1; OTTHUMG00000151701.2; ENSG00000228203.2; RNF144A-AS1; ENSG00000228203.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -127.1117 non-coding 
CPAT coding probability 0.13% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RNF144A-AS1:8 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-CMPK2-2:5
3.1 lnc-CMPK2-2:5
4.0 RNF144A-AS1:8
4.1 RNF144A-AS1:8
5.0 RNF144A-AS1:8
5.1 RNF144A-AS1:8
5.2 RNF144A-AS1:8