Transcript: ROR1-AS1:3

Basic information

LNCipedia transcript ID: ROR1-AS1:3 
LNCipedia gene ID: ROR1-AS1
Location (hg38): chr1:64094442-64112205
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1574 bp
Exons: 6
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4
Alternative transcript names: ENST00000412349.1; RP11-24J23.2-002; OTTHUMT00000025009.1; NONHSAT003702
Alternative gene names: ENSG00000223949.1; RP11-24J23.2; OTTHUMG00000009024.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 10.2464 non-coding 
CPAT coding probability 7.95% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
ROR1-AS1:3 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-ITGB3BP-4:2
4.0 ROR1-AS1:3
4.1 ROR1-AS1:3
5.0 ROR1-AS1:3
5.1 ROR1-AS1:3
5.2 ROR1-AS1:3