Transcript: RORA-AS1:12

Basic information

LNCipedia transcript ID: RORA-AS1:12 
LNCipedia gene ID: RORA-AS1
Location (hg38): chr15:60519981-60529770
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 692 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT044221
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.494 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RORA-AS1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-FOXB1-3:10
4.0 RORA-AS1:12
4.1 RORA-AS1:12
5.0 RORA-AS1:12
5.1 RORA-AS1:12
5.2 RORA-AS1:12