Transcript: RORA-AS1:22

Basic information

LNCipedia transcript ID: RORA-AS1:22 
LNCipedia gene ID: RORA-AS1
Location (hg38): chr15:60479207-60630516
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 543 bp
Exons: 5
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245534.2|ENST00000558235.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -123.8121 non-coding 
CPAT coding probability 9.84% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RORA-AS1:22 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 RORA-AS1:22
5.0 RORA-AS1:22
5.1 RORA-AS1:22
5.2 RORA-AS1:22