Transcript: RORA-AS1:7

Basic information

LNCipedia transcript ID: RORA-AS1:7 
LNCipedia gene ID: RORA-AS1
Location (hg38): chr15:60479181-60530967
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1946 bp
Exons: 6
Sources: Biogazelle lncRNA chip; Ensembl release 64 - Sep 2011; NONCODE v4
Alternative transcript names: ENST00000501579; NONHSAT044216
Alternative gene names: ENSG00000245534; AC087385.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -131.494 non-coding 
CPAT coding probability 6.64% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RORA-AS1:7 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-FOXB1-3:1
3.1 lnc-FOXB1-3:3
4.0 RORA-AS1:7
4.1 RORA-AS1:7
5.0 RORA-AS1:7
5.1 RORA-AS1:7
5.2 RORA-AS1:7