Transcript: RPARP-AS1:1

Basic information

LNCipedia transcript ID: RPARP-AS1:1 
LNCipedia gene ID: RPARP-AS1
Location (hg38): chr10:102438136-102456289
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1416 bp
Exons: 3
Sources: NONCODE v4
Alternative transcript names: NONHSAT016113
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -0.4455 non-coding 
CPAT coding probability 5.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RPARP-AS1:1 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-TMEM180-1:2
4.0 RPARP-AS1:1
4.1 RPARP-AS1:1
5.0 RPARP-AS1:1
5.1 RPARP-AS1:1
5.2 RPARP-AS1:1