Transcript: RPARP-AS1:13

Basic information

LNCipedia transcript ID: RPARP-AS1:13 
LNCipedia gene ID: RPARP-AS1
Location (hg38): chr10:102450082-102456295
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1365 bp
Exons: 3
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA180:2
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -0.4455 non-coding 
CPAT coding probability 5.61% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RPARP-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 RPARP-AS1:13
4.1 RPARP-AS1:13
5.0 RPARP-AS1:13
5.1 RPARP-AS1:13
5.2 RPARP-AS1:13