Transcript: RTCA-AS1:2

Basic information

LNCipedia transcript ID: RTCA-AS1:2 
LNCipedia gene ID: RTCA-AS1
RefSeq ID: NR_110435
Location (hg38): chr1:100264742-100266174
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 766 bp
Exons: 3
Sources: Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_110435; NR_110435.1
Alternative gene names: ; RTCA-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -120.3638 non-coding 
CPAT coding probability 12.17% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RTCA-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DBT-1:4
4.0 RTCA-AS1:2
4.1 RTCA-AS1:2
5.0 RTCA-AS1:2
5.1 RTCA-AS1:2
5.2 RTCA-AS1:2