Transcript: RUNX1-IT1:2

Basic information

LNCipedia transcript ID: RUNX1-IT1:2 
HGNC Gene Symbol: RUNX1-IT1    
HGNC Full Gene Name: RUNX1 intronic transcript 1
RefSeq ID: NR_026812
Location (hg38): chr21:35037925-35039426
Strand: -
Class: intronic
Sequence Ontology term: sense_intronic_ncRNA
Transcript size: 1502 bp
Exons: 1
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_026812.1
Alternative gene names: RUNX1-IT1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -98.4696 non-coding 
CPAT coding probability 17.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
RUNX1-IT1:2 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 RUNX1-IT1:2
5.1 RUNX1-IT1:2
5.2 RUNX1-IT1:2