Transcript: RXYLT1-AS1:5

Basic information

LNCipedia transcript ID: RXYLT1-AS1:5 
LNCipedia gene ID: RXYLT1-AS1
Location (hg38): chr12:63808582-63816328
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 487 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT029120
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 252.2962 coding 
CPAT coding probability 0.78% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
RXYLT1-AS1:5 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-DPY19L2-2:2
4.0 TMEM5-AS1:2
4.1 TMEM5-AS1:2
5.0 TMEM5-AS1:2
5.1 RXYLT1-AS1:3
5.2 RXYLT1-AS1:5