Transcript: SALRNA1:7

Basic information

LNCipedia transcript ID: SALRNA1:7 
HGNC Gene Symbol: SALRNA1    
HGNC Full Gene Name: senescence associated long non-coding RNA 1
Ensembl Gene ID: ENSG00000258952
Ensembl Transcript ID: ENST00000555871
Location (hg38): chr14:60639216-60642589
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 2086 bp
Exons: 2
Sources: Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000555871.2
Alternative gene names: ENSG00000258952.2; SALRNA1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -43.6879 non-coding 
CPAT coding probability 0.40% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SALRNA1:7 no no no no

Available literature

  1. Abdelmohsen (2013), Senescence-associated lncRNAs: senescence-associated long noncoding RNAs., Aging Cell


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 lnc-MNAT1-6:3
4.1 lnc-MNAT1-6:3
5.0 lnc-MNAT1-6:3
5.1 SALRNA1:3
5.2 SALRNA1:7