Transcript: SATB1-AS1:2

Basic information

LNCipedia transcript ID: SATB1-AS1:2 
LNCipedia gene ID: SATB1-AS1
Location (hg38): chr3:18444378-18531315
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3644 bp
Exons: 6
Sources: NONCODE v4
Alternative transcript names: NONHSAT088563
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score 106.7298 coding 
CPAT coding probability 44.38% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SATB1-AS1:2 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-KCNH8-1:3
4.0 SATB1-AS1:2
4.1 SATB1-AS1:2
5.0 SATB1-AS1:2
5.1 SATB1-AS1:2
5.2 SATB1-AS1:2