Transcript: SCAMP1-AS1:12

Basic information

LNCipedia transcript ID: SCAMP1-AS1:12 
LNCipedia gene ID: SCAMP1-AS1
Location (hg38): chr5:78355373-78360367
Strand: -
Class: bidirectional
Sequence Ontology term:
Transcript size: 3807 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000245556.2|MICT00000284702.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -14.2378 non-coding 
CPAT coding probability 4.66% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SCAMP1-AS1:12 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SCAMP1-AS1:12
5.0 SCAMP1-AS1:12
5.1 SCAMP1-AS1:12
5.2 SCAMP1-AS1:12