Transcript: SDCBP2-AS1:11

Basic information

LNCipedia transcript ID: SDCBP2-AS1:11 
LNCipedia gene ID: SDCBP2-AS1
Location (hg38): chr20:1359632-1361977
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1110 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT078102
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -35.0503 non-coding 
CPAT coding probability 3.02% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SDCBP2-AS1:11 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNPH-2:10
4.0 SDCBP2-AS1:11
4.1 SDCBP2-AS1:11
5.0 SDCBP2-AS1:11
5.1 SDCBP2-AS1:11
5.2 SDCBP2-AS1:11