Transcript: SDCBP2-AS1:6

Basic information

LNCipedia transcript ID: SDCBP2-AS1:6 
HGNC Gene Symbol: SDCBP2-AS1    
HGNC Full Gene Name: SDCBP2 antisense RNA 1
Ensembl Gene ID: ENSG00000234684
Ensembl Transcript ID: ENST00000609470
Location (hg38): chr20:1325410-1378734
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2158 bp
Exons: 3
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609470.1; ENST00000609470.5
Alternative gene names: ENSG00000234684.2; SDCBP2-AS1; ENSG00000234684.6;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 1 non-coding 
PhyloCSF score -24.6861 non-coding 
CPAT coding probability 8.27% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SDCBP2-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SNPH-2:7
4.0 SDCBP2-AS1:6
4.1 SDCBP2-AS1:6
5.0 SDCBP2-AS1:6
5.1 SDCBP2-AS1:6
5.2 SDCBP2-AS1:6