Transcript: SDCBP2-AS1:7

Basic information

LNCipedia transcript ID: SDCBP2-AS1:7 
LNCipedia gene ID: SDCBP2-AS1
Location (hg38): chr20:1325417-1350479
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 233 bp
Exons: 2
Sources: Sun and Gadad et al., 2015
Alternative transcript names: LncRNA835:1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -320.1261 non-coding 
CPAT coding probability 2.14% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SDCBP2-AS1:7 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.0 SDCBP2-AS1:7
4.1 SDCBP2-AS1:7
5.0 SDCBP2-AS1:7
5.1 SDCBP2-AS1:7
5.2 SDCBP2-AS1:7