Transcript: SHANK2-AS1:1

Basic information

LNCipedia transcript ID: SHANK2-AS1:1 
HGNC Gene Symbol: SHANK2-AS1    
HGNC Full Gene Name: SHANK2 antisense RNA 1
Ensembl Gene ID: ENSG00000226627
Ensembl Transcript ID: ENST00000429561
RefSeq ID: NR_046567
Location (hg38): chr11:70631094-70635490
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 2252 bp
Exons: 3
Sources: Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000429561.1; SHANK2-AS1-001; OTTHUMT00000327643.1; NONHSAT022668; NR_046567; NR_046567.1
Alternative gene names: ENSG00000226627.1; SHANK2-AS1; OTTHUMG00000154610.1;

RNA sequence:
AATGACAGAAGCAGCAGCGAGAGCCCTTCAGAGGACCGCGAAACGCGAACTCCCACCCCAGCAAACCACCAAGGGGAAGAGGCGGGCCCCCATCCAGGAGGCCTTAGGAACAGGAGAGCTGACTTTTCTAAAGCAAATAAGGCAGTGTTCTCCCCAGGGCGCCAGGCTTCCCCAGCTCCAAGTCTGGGCGTCTGAAATCTGCTGTGTAATTGGATCACGCCCGGCCCGTGCTGAGCGCCCATCTGCGCCCGTCTTGGAAAACACAAGTCTCAGAGAAGGAAAGCAGTTGCCACAGTGTTCAGCTTAACCAAGTCATCTTATTTGATATGTGAAAGTTCTTCGAGATGGAAGAATCTCAGCTCATCACTGCGAAGGCATGCCAGGATTAGGAAGTCATCAGATGCAAGCCTGCAAGCCTCAGTGTACTCCTCAATGTCTGCAGGGCCCACCCCAGAGAGAGGCCCCTGGGTGACCAGCCGGTGAGGAGCTTCAAGAGGAAGGATTCACCATCACCACCTGGATCCTGTGTGCAGCTTTTGTCACAGCGGTGGCGAGCACAGTTTCTGCCTCCTGGGGAGATGGGGTGTGAAGCTCACAGCACCTGCGTGTGGCTGGGCCCAACATTAACAGCGCTGCAAGAGCTCACCTCCATTTATAGGAAGTGGGAAGGACCCAAGGACTGGCCGATGACACCACAGGAGGCAGAAGGCACATCGGGGGTTGGGGGTAGCCTATGGCCAACCTACCCTGTCCCTCTAACAACCTACCCTGTCCCTATAACACGTTGCTGGCAGGAAACACGGGAGATGGCTCAGACTGGAGACCTGGGGACATATCTACCAAGTGCCACGTGGGTCCTGGGTCAAAGTCACCACCGTGAAAAGACATTTCTGAGATAATTTGGGACATGTGCTAATGGAGGGGTTTCAGATTCCACCCAGAGACCACTGCTGGGTGCGTGGATGGGACAGTGACACTGGGGCCCGCAAGAAAGATCCCATGCTGTGAGAGACAGACTGAAGGGGAAGAGGGAGTGACGCGATGCCTGGGATTTGCTGAAGAAAAAAAAAAGAATAAAAAGGTCCGTCTGTATATGGATGGCAAGAATTTCTTGGTAACAAAAGCACAGCCAATAAAAGAAAAAATAAATACTAAGGTCGATGAAAATTTAAAACTTTTGTGCATCAAAGGGCACCATCAACAGAGCAAAAAGGCAGCTAAAGAATGGGAGGAAATATTTGCAAATCATGTATCTGGTAAGGGGTTAGTATCCAGAATGTGCAGAAAACTCTTACAACTCAACAACAGAAACAAAAATCTAATTTAAAAATGGGCAAACTGGCCAGGTGAGGTGGCTCATGCCTGTAATCCCAGCACTTTGGGAGGCCGAGGTGGGCGGATCACTTGAGGTCAGGAGTTCGAGACCAGACTGGCCAACATGGCAAAACCCCATCTCCACTAAAATTTCAAAAATTAGCCAGGTGTGATGGCACGTCCCTGTAACCCCAGTTACTCGGGAGGCTGAGGCAGAAGAATTGCTGGAACCCAGGAGGCAAAGGTCGCAGTGAGGTGAGATCACGCCACTGCACTCTAGCCTGGGTGACAGAGTGAGACTCCGTCTCATAAATAAATAAATAAAAATGGGTAAAGGACTTGAATAGACATTTCTCCAAAGAAGAGATACAAATGGCTGATAAGGACTTTTCTGAAAAGATGTTCAACACCACTAATCAATTAGAGAAAGGCAAATCCAAACTACAACGGGACACCATCTCACACCTGTTAGGATGGCCACGATCCTAAAACAGAAAGTAATGACGCTGGTGAGTATGTGGGGAAACTGGAGCCCTTGGGCACCGCTGGCAGGAAGGTAAAGTGGTGCAGCCCCTGTGGAACATGGCATGGCTGCTCCTCAAAACCTTAAACACAGAACGAGCACGTGAGCCAGCAATGCCACTTCTGCATCTATGCCCGAAGGCATTGACAGCGGGGTCTTGAAGAGATATCTGCACACCCGCGTTCACGGTGGCAGCACTATTCATGGTAGCTAAGAGGTGGACGCAACCTAAGTGTCCACCTACAGATGAACAGACACACAAAAGGTGGTGTTTCCGTAGAGTTGGGATAGTTATCATTCAGGCTTAAACCAGAAGGAGATTCTGATGCATGCTACAACACGGAGGAACCTCGAAGGTATTACACTGAGTGAAATGTACCAAGCACAAAAAGATAAATACTGCAGGATTCCACTG