Transcript: SLC25A30-AS1:1

Basic information

LNCipedia transcript ID: SLC25A30-AS1:1 
HGNC Gene Symbol: SLC25A30-AS1    
HGNC Full Gene Name: SLC25A30 antisense RNA 1
Ensembl Gene ID: ENSG00000251015
Ensembl Transcript ID: ENST00000506633
RefSeq ID: NR_047031
Location (hg38): chr13:45418162-45420371
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 701 bp
Exons: 2
Sources: Ensembl release 64 - Sep 2011; Gencode v13; Ensembl release 68 - Jul 2012; NONCODE v4; Ensembl release 75 - Feb 2014; Refseq - Dec 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018; Refseq - NCBI Annotation Release 106
Alternative transcript names: ENST00000506633; ENST00000506633.1; SLC25A30-AS1-001; OTTHUMT00000373637.1; NONHSAT033609; NR_047031; NR_047031.1
Alternative gene names: ENSG00000251015; XXyac-YMR12DG2.1; ENSG00000251015.1; SLC25A30-AS1; OTTHUMG00000163473.1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -114.8741 non-coding 
CPAT coding probability 68.23% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SLC25A30-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
1.3 lnc-COG3-1:1
3.1 lnc-COG3-1:1
4.0 SLC25A30-AS1:1
4.1 SLC25A30-AS1:1
5.0 SLC25A30-AS1:1
5.1 SLC25A30-AS1:1
5.2 SLC25A30-AS1:1