Transcript: SLC25A5-AS1:1

Basic information

LNCipedia transcript ID: SLC25A5-AS1:1 
LNCipedia gene ID: SLC25A5-AS1
RefSeq ID: NR_028443
Location (hg38): chrX:119466033-119469120
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 3088 bp
Exons: 1
Sources: NONCODE v4; Refseq - Dec 2014; Refseq - NCBI Annotation Release 106
Alternative transcript names: NONHSAT138320; NR_028443; NR_028443.1
Alternative gene names: ; SLC25A5-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -74.0253 non-coding 
CPAT coding probability 61.97% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SLC25A5-AS1:1 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXorf56-1:4
4.0 SLC25A5-AS1:1
4.1 SLC25A5-AS1:1
5.0 SLC25A5-AS1:1
5.1 SLC25A5-AS1:1
5.2 SLC25A5-AS1:1