Transcript: SLC25A5-AS1:5

Basic information

LNCipedia transcript ID: SLC25A5-AS1:5 
HGNC Gene Symbol: SLC25A5-AS1    
HGNC Full Gene Name: SLC25A5 antisense RNA 1
Ensembl Gene ID: ENSG00000224281
Ensembl Transcript ID: ENST00000609227
Location (hg38): chrX:119467307-119469092
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 555 bp
Exons: 2
Sources: Ensembl release 75 - Feb 2014; Ensembl release 83 - Dec 2015; Ensembl release 87 - Dec 2016; Ensembl release 90 - Aug 2017; Ensembl release 92 - Apr 2018
Alternative transcript names: ENST00000609227.1
Alternative gene names: ENSG00000224281.4; SLC25A5-AS1;


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -301.1056 non-coding 
CPAT coding probability 0.85% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SLC25A5-AS1:5 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-CXorf56-1:6
4.0 SLC25A5-AS1:5
4.1 SLC25A5-AS1:5
5.0 SLC25A5-AS1:5
5.1 SLC25A5-AS1:5
5.2 SLC25A5-AS1:5