Transcript: SLC26A4-AS1:10

Basic information

LNCipedia transcript ID: SLC26A4-AS1:10 
LNCipedia gene ID: SLC26A4-AS1
Location (hg38): chr7:107653992-107662006
Strand: -
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 647 bp
Exons: 2
Sources: NONCODE v4
Alternative transcript names: NONHSAT122698
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -88.991 non-coding 
CPAT coding probability 44.51% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SLC26A4-AS1:10 yes no no no

Available literature

  1. Peffers (2015), Transcriptome analysis of ageing in uninjured human Achilles tendon., Arthritis Res. Ther.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-COG5-1:6
4.0 SLC26A4-AS1:10
4.1 SLC26A4-AS1:10
5.0 SLC26A4-AS1:10
5.1 SLC26A4-AS1:10
5.2 SLC26A4-AS1:10