Transcript: SLC2A1-AS1:12

Basic information

LNCipedia transcript ID: SLC2A1-AS1:12 
LNCipedia gene ID: SLC2A1-AS1
Location (hg38): chr1:42959104-42974417
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 1064 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227533.1|FTMT20300000383.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -31.6412 non-coding 
CPAT coding probability 0.96% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SLC2A1-AS1:12 yes no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SLC2A1-AS1:12
5.0 SLC2A1-AS1:12
5.1 SLC2A1-AS1:12
5.2 SLC2A1-AS1:12