Transcript: SLC2A1-AS1:6

Basic information

LNCipedia transcript ID: SLC2A1-AS1:6 
LNCipedia gene ID: SLC2A1-AS1
Location (hg38): chr1:42959046-43196506
Strand: +
Class: sense-overlapping
Sequence Ontology term: sense_overlap_ncRNA
Transcript size: 12064 bp
Exons: 7
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000227533.1|ENCT00000004978.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 22.4366 non-coding 
CPAT coding probability 52.94% coding 
Bazzini small ORFs 0 non-coding 

In stringent set: no

Locus conservation

Locus conservation?
SLC2A1-AS1:6 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SLC2A1-AS1:6
5.0 SLC2A1-AS1:6
5.1 SLC2A1-AS1:6
5.2 SLC2A1-AS1:6