Transcript: SMC2-AS1:13

Basic information

LNCipedia transcript ID: SMC2-AS1:13 
LNCipedia gene ID: SMC2-AS1
Location (hg38): chr9:104083508-104091817
Strand: -
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 3903 bp
Exons: 3
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000270332.1|HBMT00001489494.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score 4.8023 non-coding 
CPAT coding probability 0.83% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMC2-AS1:13 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 SMC2-AS1:13
5.0 SMC2-AS1:13
5.1 SMC2-AS1:13
5.2 SMC2-AS1:13