Transcript: SMIM15-AS1:23

Basic information

LNCipedia transcript ID: SMIM15-AS1:23 
LNCipedia gene ID: SMIM15-AS1
Location (hg38): chr5:61162102-61232040
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 764 bp
Exons: 4
Sources: FANTOM CAT (stringent)
Alternative transcript names: ENSG00000251279.1|ENST00000506902.1
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -65.2834 non-coding 
CPAT coding probability 1.25% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM15-AS1:23 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
4.1 lnc-NDUFAF2-2:9
5.0 lnc-NDUFAF2-2:9
5.1 SMIM15-AS1:7
5.2 SMIM15-AS1:23