Transcript: SMIM2-AS1:20

Basic information

LNCipedia transcript ID: SMIM2-AS1:20 
LNCipedia gene ID: SMIM2-AS1
RefSeq ID: NR_104065
Location (hg38): chr13:44110549-44154079
Strand: +
Class: antisense
Sequence Ontology term: antisense_lncRNA
Transcript size: 891 bp
Exons: 5
Sources: Refseq - NCBI Annotation Release 106
Alternative transcript names: NR_104065.1
Alternative gene names: SMIM2-AS1


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites non-coding 
PhyloCSF score -150.8548 non-coding 
CPAT coding probability 4.52% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM2-AS1:20 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
5.0 SMIM2-AS1:20
5.1 SMIM2-AS1:20
5.2 SMIM2-AS1:20