Transcript: SMIM2-AS1:3

Basic information

LNCipedia transcript ID: SMIM2-AS1:3 
LNCipedia gene ID: SMIM2-AS1
Location (hg38): chr13:44142309-44143523
Strand: +
Class: intergenic
Sequence Ontology term: lincRNA
Transcript size: 1215 bp
Exons: 1
Sources: NONCODE v4
Alternative transcript names: NONHSAT033483
Alternative gene names:


RNA sequence:

Structure:

Protein coding potential

Metric Raw result Interpretation
PRIDE reprocessing 2.0 0 non-coding 
Lee translation initiation sites 0 non-coding 
PhyloCSF score -115.512 non-coding 
CPAT coding probability 0.60% non-coding 
Bazzini small ORFs 0 non-coding 

In stringent set: yes

Locus conservation

Locus conservation?
SMIM2-AS1:3 no no no no

Available literature

No linked literature available at this time.


LNCipedia transcript ID history

LNCipedia version LNCipedia transcript ID
3.1 lnc-SERP2-1:4
4.0 SMIM2-AS1:3
4.1 SMIM2-AS1:3
5.0 SMIM2-AS1:3
5.1 SMIM2-AS1:3
5.2 SMIM2-AS1:3